Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916348.1_cds_XP_016466052.1_58947
CDS Infomation

[gene=LOC107788836] [db_xref=GeneID:107788836] [protein=putative late blight resistance protein homolog R1A-10] [protein_id=XP_016466052.1] [location=complement(join(17365..17444,18126..18409,18469..19610))] [gbkey=CDS]
Sequence

ATGAGTTATAGTTACTTGCCCGATCACCTGAAATCATGCTTCCTTTCTATGGTAGCTTTT
CCGGAAGGTTTTGAGGTTGAAACTCATAGATTGATTCAATTATGGGTTGCTGATGGTTTT
CTAAGGAATGAAAGGGTCAAAAGCTTGGAAGAAATTGGAAAAGAATGGCTGGAGGATCTT
ATTAGTAGGAACTTAATAATGGTTATAAAACGGAGACTCAATGGCGAGATGAAAACATGT
GGCGTTCATGATCTGGTGCGCGACATGATTTTAAGACAAGCTGAAAAAGAGAAGTTTATG
CAGGTAACCAGAATTCATAAAGTCATAAGAAAATTCAATGATTCTGCTTGTAAGCCTTAT
ATTCGTCGTTGTAGTTTCCATTCAACCATTTCTCCGAGTGATTGCTGGAATTCATCCTCT
AGTTTCACCCGAACTTTATATTTATTAAATGGACTAAAACTTGTATCGCCCCTTTCTAAA
CAAGTACCTTTTTTAGCGCGCTTCAAACTTCTAAGAGTGTTGGCAATCCTTCAGTATACT
TTCCGAGAATTCCCTCTCGAGTTAACAAAATTAGTACATCTCAGATACCTTGAATTCAAC
TGTTATGATGATCTTCACAGGTCAGTGTCCGAGCTGTATAATCTGCAAAACTTGGTTTTT
GGCGGACACTCTAATTTACCAGTATCGGATATCTGGAAAATGAAACTTTTGAGGCATCTT
CAGGTAAGAAAGATCTCTTCTTTTCGTGTTCCATCGAGTAAAGAAGGGTCCGGTTACAAG
CTACAAAATCTCGAGGGACTTTCAGATATAAGTATTTCCTGTTGTACTAAGGAATTGTTT
ACTGGTTTTCCCAATCTAAAGAGGCTGAAAATTCATGGCGCTTGGGCAGAATGCAGGAGA
GATATGATTTTCCAGACGCTAAATAACCTTTCGTGTTTAAATAAGCTTGAAATATTGAAG
ATAATCTGCTCCAGAAAATTATACCCGCACCTTCTCCCAAGTAAGTATGCTTTGCCTACA
TCTCTGAAGAGGTTGACATTAAGATGTACTTATTTACCATGGGAAGACATGGCTAATATT
GTAACACTGCCAAATCTCGAAGAGCTTAAAATTAAAGACAATGGATTTAATTTGACGGCG
ACGACAAATCTGAAGCATTGGGACGCTGGCAGTGTTAACTTCCCAATGCTGAAACGCCTA
GTTCTGAAACGATGCTTATACCTGGAGGAAATTCCTAAAGATATTGGCAAAATTTGTACG
TTGGAGTCAATAGAGTTGCATAACTGCAGAAGTTCTGTTGCAAAATCCGTCAAAGAAATT
CAAGAAGAGCAAGAGAGCATGGCGAATGATAACCTTAGTGTTCGCGTCAGCGAGAAACCT
TGTGAGATTCAAACTATCTCAAAAAAATACTTCCAAATCAGTTACAGAATCAAGGCACCA
TCCATAGCATCAACAAATAGAAGAAAAGATCGAAGATTTGATGATGCTAAAACAAAGGAA
GTCTAG

Peptide Sequence

PEP ID

XP_016466052.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-10 [Nicotiana tabacum]
Sequence

MSYSYLPDHLKSCFLSMVAFPEGFEVETHRLIQLWVADGFLRNERVKSLEEIGKEWLEDL
ISRNLIMVIKRRLNGEMKTCGVHDLVRDMILRQAEKEKFMQVTRIHKVIRKFNDSACKPY
IRRCSFHSTISPSDCWNSSSSFTRTLYLLNGLKLVSPLSKQVPFLARFKLLRVLAILQYT
FREFPLELTKLVHLRYLEFNCYDDLHRSVSELYNLQNLVFGGHSNLPVSDIWKMKLLRHL
QVRKISSFRVPSSKEGSGYKLQNLEGLSDISISCCTKELFTGFPNLKRLKIHGAWAECRR
DMIFQTLNNLSCLNKLEILKIICSRKLYPHLLPSKYALPTSLKRLTLRCTYLPWEDMANI
VTLPNLEELKIKDNGFNLTATTNLKHWDAGSVNFPMLKRLVLKRCLYLEEIPKDIGKICT
LESIELHNCRSSVAKSVKEIQEEQESMANDNLSVRVSEKPCEIQTISKKYFQISYRIKAP
SIASTNRRKDRRFDDAKTKEV

Transcript Sequence

Gene sequence data has not been registered.